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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15850227_15854100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15850227 - 15854100

Intron Length:

3874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TGCAGCTCACCA

Flanking Amino Acid:

YKYSLQKSENAFKAAVLIQR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

0.28

1.1

63.1

35.8

Major PPT

77.6

0.62

0.8

70.5

36.3

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

42.5

-0.5

2.1

52.91

Associated Gene:

Gene:

PPEF2

Ensembl Gene ID:

ENSAPLG00000016436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017154

15838996 - 15854161

15166