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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15909609_15910097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15909609 - 15910097

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TCATCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TGTTCCTCATCT

Flanking Amino Acid:

RTTFVYRMAELCKKCDPVEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

80.4

0.76

80.3

31.8

Major PPT

81.7

0.71

0.8

73.3

36.9

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

66.2

0.59

1.8

85.48

40.5

Associated Gene:

Gene:

JCHAIN

Ensembl Gene ID:

ENSAPLG00000024464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044589

15908407 - 15914734

6328

ENSAPLT00000032610

15908407 - 15914782

6376