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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15910179_15910677_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15910179 - 15910677

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

CCTTCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

GTTTTCACAAGA

Flanking Amino Acid:

EEILERNIRITVPLRSRQNI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.3

70.6

41.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

84.7

0.78

0.7

76.3

32.3

Minor 5ss

34.4

-1.8

3.2

42.8

37.9

Minor BPS

47.6

-0.1

2.1

65.1

Associated Gene:

Gene:

JCHAIN

Ensembl Gene ID:

ENSAPLG00000024464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044589

15908407 - 15914734

6328

ENSAPLT00000032610

15908407 - 15914782

6376