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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15955400_15957194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15955400 - 15957194

Intron Length:

1795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

TTGTGTGTAACT

Flanking Amino Acid:

TASVKDLPGLKTPVGRGRAW

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

78.6

0.64

0.8

73.2

31.6

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

52.3

0.15

2.4

79.01

43.8

Associated Gene:

Gene:

RUFY3

Ensembl Gene ID:

ENSAPLG00000015819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017550

15932734 - 15966530

33797

ENSAPLT00000016546

15932734 - 15977169

44436