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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15957297_15958305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15957297 - 15958305

Intron Length:

1009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GTCCATCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAGAT

U12 Branch Point Sequence:

TGTTGTCCATCC

Flanking Amino Acid:

KALINRKDLLSEFYEPNALM

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.9

30.1

Major BPS

50.8

0.02

1.1

47.1

36.1

Major PPT

73.1

0.52

0.9

65.8

35.7

Minor 5ss

-2.1

2.8

42.5

44.3

Minor BPS

40.2

-0.7

2.3

55.92

42.4

Associated Gene:

Gene:

RUFY3

Ensembl Gene ID:

ENSAPLG00000015819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016546

15932734 - 15977169

44436

ENSAPLT00000017550

15932734 - 15966530

33797