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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15958430_15959080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15958430 - 15959080

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGGT

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTAATGTAAAA

Flanking Amino Acid:

CMKGEDLDSQVGVIDFSMYL

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

60.8

43.9

Major BPS

90.7

1.01

0.7

19.9

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

29.9

-2.3

3.8

47.5

47.9

Minor BPS

46.8

-0.2

2.2

66.32

39.8

Associated Gene:

Gene:

RUFY3

Ensembl Gene ID:

ENSAPLG00000015819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017550

15932734 - 15966530

33797

ENSAPLT00000016546

15932734 - 15977169

44436