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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15959143_15960447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15959143 - 15960447

Intron Length:

1305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTGAT

U12 Branch Point Sequence:

TCTGGCTAAGCT

Flanking Amino Acid:

KDGNSTKGNEGDGQITAILD

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

71.6

40.2

Major BPS

55.7

0.14

1.4

49.1

46.3

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

39.2

-1.2

2.8

41.9

44.5

Minor BPS

-0.3

2.3

49.6

Associated Gene:

Gene:

RUFY3

Ensembl Gene ID:

ENSAPLG00000015819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017550

15932734 - 15966530

33797

ENSAPLT00000016546

15932734 - 15977169

44436