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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15960514_15960618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15960514 - 15960618

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTCAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TTCCTTTCAACA

Flanking Amino Acid:

NYVEELNRHLSATVNNLQAK

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

73.5

37.1

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

80.1

0.68

0.8

76.9

30.3

Minor 5ss

33.7

-1.9

3.2

47.5

Minor BPS

58.4

0.26

1.5

68.33

38.3

Associated Gene:

Gene:

RUFY3

Ensembl Gene ID:

ENSAPLG00000015819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017550

15932734 - 15966530

33797

ENSAPLT00000016546

15932734 - 15977169

44436