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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15960689_15962607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15960689 - 15962607

Intron Length:

1919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

GTTTTGTTCACA

Flanking Amino Acid:

EKSNTKLTEELAVANNRIIT

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.6

90.6

20.3

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

81.6

0.71

0.9

75.8

38.1

Minor 5ss

36.3

-1.6

3.3

47.2

Minor BPS

49.8

-0

2.4

71.26

41.2

Associated Gene:

Gene:

RUFY3

Ensembl Gene ID:

ENSAPLG00000015819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017550

15932734 - 15966530

33797

ENSAPLT00000016546

15932734 - 15977169

44436