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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15963524_15964146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15963524 - 15964146

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TAGTGCTGACTG

Flanking Amino Acid:

QLKEETQLRLDVEKELEVQI

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

74.1

Major BPS

66.3

0.4

1.1

41.8

Major PPT

74.3

0.55

64.9

45.6

Minor 5ss

32.7

-2

3.1

37.9

40.9

Minor BPS

43.7

-0.6

2.1

48.97

Associated Gene:

Gene:

RUFY3

Ensembl Gene ID:

ENSAPLG00000015819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017550

15932734 - 15966530

33797

ENSAPLT00000016546

15932734 - 15977169

44436