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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15964315_15965269_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15964315 - 15965269

Intron Length:

955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

ACTTACAGAAAG

Flanking Amino Acid:

LKHELSFKLQSSDMGVKQKS

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

87.7

0.85

0.7

81.5

35.9

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

43.6

-0.6

50.52

42.6

Associated Gene:

Gene:

RUFY3

Ensembl Gene ID:

ENSAPLG00000015819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017550

15932734 - 15966530

33797

ENSAPLT00000016546

15932734 - 15977169

44436