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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15971880_15976990_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15971880 - 15976990

Intron Length:

5111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACACAA

5'SS Class:

major

3'SS Sequence:

CAAGTGTCTTAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

AAAACCTCAAGT

Flanking Amino Acid:

KVPKNWLKPVASLNFSLLFL

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

67.8

39.3

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

55.6

0.13

1.1

56.7

43.2

Minor 5ss

36.8

-1.5

3.1

47.7

Minor BPS

49.6

0.05

1.9

66.18

43.5

Associated Gene:

Gene:

RUFY3

Ensembl Gene ID:

ENSAPLG00000015819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016546

15932734 - 15977169

44436