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Intron Name: Anas_platyrhynchos_platyrhynchos_4_15981892_15982021_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
15981892 - 15982021

Intron Length:
130

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACC|GTGAGTCGC

5'SS Class:
major

3'SS Sequence:
CTTGATTCCCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAATGAT

U12 Branch Point Sequence:
TTTCCCTTGATT

Flanking Amino Acid:
SSDAKRQNQNQLGNEETESS

Intron Amino Acid Position:
305

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62.7
0.3
1.3
54.4
44.7

Major BPS
76.8
0.67
1
66
40.9

Major PPT
74.3
0.55
0.9
65.5
40.8

Minor 5ss
31
-2.2
2.9
40.2
38.9

Minor BPS
81.9
1.08
1
92.92
28.4

Associated Gene:

Gene:
GRSF1

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15980729 - 15987920
7192

15979322 - 15987920
8599