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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16182576_16185277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16182576 - 16185277

Intron Length:

2702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTGCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TCTTCCTCATCC

Flanking Amino Acid:

MEASSLPQVVEMIVDNQIET

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

77.9

38.6

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

67.5

0.39

1.1

62.3

43.3

Minor 5ss

34.6

-1.7

2.7

34.2

41.4

Minor BPS

62.7

0.38

1.9

74.6

42.2

Associated Gene:

Gene:

SLC4A4

Ensembl Gene ID:

ENSAPLG00000011271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044581

16075091 - 16274306

199216

ENSAPLT00000021013

16075091 - 16276211

201121

ENSAPLT00000011918

16055353 - 16275185

219833