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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16185431_16191583_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16185431 - 16191583

Intron Length:

6153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGATGT

5'SS Class:

major

3'SS Sequence:

TGCAACACAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTGCAA

U12 Branch Point Sequence:

CTGCTTGCAACA

Flanking Amino Acid:

ADIGKTVSSATRSPLESSVP

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

66.2

40.6

Major BPS

53.5

0.09

1.4

39.8

Major PPT

47.8

-0.1

1.1

42.9

36.1

Minor 5ss

-1.1

3.4

55.6

43.2

Minor BPS

42.4

-0.5

2.1

51.78

40.7

Associated Gene:

Gene:

SLC4A4

Ensembl Gene ID:

ENSAPLG00000011271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021013

16075091 - 16276211

201121