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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16185458_16196947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16185458 - 16196947

Intron Length:

11490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGCAG

5'SS Class:

major

3'SS Sequence:

ATTGTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GGTGCTTTAATT

Flanking Amino Acid:

ASRMFTNPDNGSPAMTHRNL

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

55.1

43.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

83.6

0.76

0.8

36.7

Minor 5ss

30.3

-2.3

3.2

35.4

42.3

Minor BPS

68.3

0.65

1.4

77.12

39.8

Associated Gene:

Gene:

SLC4A4

Ensembl Gene ID:

ENSAPLG00000011271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011918

16055353 - 16275185

219833