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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16197025_16215747_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16197025 - 16215747

Intron Length:

18723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTACCGATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTCTCTTTTACC

Flanking Amino Acid:

DISDKPEKDQLKNKFMKKLP

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.3

32.2

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

72.5

0.51

66.4

39.6

Minor 5ss

48.4

-0.1

2.8

67.4

Minor BPS

70.4

0.62

1.6

78.35

37.7

Associated Gene:

Gene:

SLC4A4

Ensembl Gene ID:

ENSAPLG00000011271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044581

16075091 - 16274306

199216

ENSAPLT00000021013

16075091 - 16276211

201121

ENSAPLT00000011918

16055353 - 16275185

219833