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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16225046_16226491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16225046 - 16226491

Intron Length:

1446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTACAT

U12 Branch Point Sequence:

CCTTCCTTACAG

Flanking Amino Acid:

RAIATLMSDEVFHDIAYKAR

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

52.4

0.06

1.3

62.9

43.3

Major PPT

81.8

0.72

0.7

75.4

26.9

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

55.7

0.04

1.9

60.06

47.5

Associated Gene:

Gene:

SLC4A4

Ensembl Gene ID:

ENSAPLG00000011271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044581

16075091 - 16274306

199216

ENSAPLT00000021013

16075091 - 16276211

201121

ENSAPLT00000011918

16055353 - 16275185

219833