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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16234111_16238392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16234111 - 16238392

Intron Length:

4282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGATAT

U12 Branch Point Sequence:

CCTGCTTCCACT

Flanking Amino Acid:

VFERLLFNFSKDNDFDYLEF

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

64.1

0.35

1.3

45.5

Major PPT

85.6

0.8

0.9

80.6

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

46.2

-0.2

2.1

62.98

47.6

Associated Gene:

Gene:

SLC4A4

Ensembl Gene ID:

ENSAPLG00000011271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044581

16075091 - 16274306

199216

ENSAPLT00000021013

16075091 - 16276211

201121

ENSAPLT00000011918

16055353 - 16275185

219833