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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16244059_16249013_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16244059 - 16249013

Intron Length:

4955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

CATCATGGAAAT

Flanking Amino Acid:

DGLPYSSVEMYNTTIDWSSL

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

36.5

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

1.03

0.5

92.7

17.1

Minor 5ss

32.2

-2

3.1

41.8

Minor BPS

38.5

-0.7

2.1

53.84

Associated Gene:

Gene:

SLC4A4

Ensembl Gene ID:

ENSAPLG00000011271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044581

16075091 - 16274306

199216

ENSAPLT00000021013

16075091 - 16276211

201121

ENSAPLT00000011918

16055353 - 16275185

219833