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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16249203_16251795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16249203 - 16251795

Intron Length:

2593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

ACTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

ACGATATCAACT

Flanking Amino Acid:

FKTSRYFPTTARKLISDFAI

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

69.5

41.3

Major BPS

70.2

0.5

72.1

Major PPT

80.1

0.68

0.9

76.9

36.6

Minor 5ss

41.7

-0.9

3.1

63.6

40.6

Minor BPS

46.4

-0.2

1.8

60.24

Associated Gene:

Gene:

SLC4A4

Ensembl Gene ID:

ENSAPLG00000011271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044581

16075091 - 16274306

199216

ENSAPLT00000021013

16075091 - 16276211

201121

ENSAPLT00000011918

16055353 - 16275185

219833