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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16251910_16252507_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16251910 - 16252507

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGCCCTTAAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TTGCCCTTAAAA

Flanking Amino Acid:

PKLIVPSEFKPTSPERGWFI

Intron Amino Acid Position:

764

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

88.7

25.1

Major BPS

72.3

0.55

73.3

28.9

Major PPT

62.6

0.29

1.1

64.2

35.7

Minor 5ss

43.5

-0.7

2.6

59.2

45.4

Minor BPS

73.6

0.74

1.4

78.54

37.5

Associated Gene:

Gene:

SLC4A4

Ensembl Gene ID:

ENSAPLG00000011271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044581

16075091 - 16274306

199216

ENSAPLT00000021013

16075091 - 16276211

201121

ENSAPLT00000011918

16055353 - 16275185

219833