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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16257280_16258689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16257280 - 16258689

Intron Length:

1410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCAA

5'SS Class:

strong_major

3'SS Sequence:

GATTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

ATACTACTAACC

Flanking Amino Acid:

PGEQPKFLGVREQRVTGVIV

Intron Amino Acid Position:

877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

75.9

35.2

Major BPS

76.8

0.67

0.9

75.9

Major PPT

80.3

0.68

77.2

41.6

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

47.6

-0.2

1.9

61.37

36.8

Associated Gene:

Gene:

SLC4A4

Ensembl Gene ID:

ENSAPLG00000011271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044581

16075091 - 16274306

199216

ENSAPLT00000021013

16075091 - 16276211

201121

ENSAPLT00000011918

16055353 - 16275185

219833