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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16275186_16276109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

16275186 - 16276109

Intron Length:

924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

ATGTGCTTACCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

91.8

0.94

0.6

88.4

21.2

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

58.1

0.33

2.1

77.95

44.5

Associated Gene:

Gene:

SLC4A4

Ensembl Gene ID:

ENSAPLG00000011271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021013

16075091 - 16276211

201121