Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_16304753_16304904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16304753 - 16304904

Intron Length:

152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACCGGG

5'SS Class:

major

3'SS Sequence:

TTATGCCACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CCTTCTTTTATG

Flanking Amino Acid:

KDSSACLDSKRQQVGAELPT

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.2

45.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

68.5

0.42

62.2

38.8

Minor 5ss

35.8

-1.6

3.3

46.8

48.5

Minor BPS

55.5

0.03

1.7

58.31

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011564

16304123 - 16310115

5993