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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16306706_16307429_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16306706 - 16307429

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

ACATCTGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAA

U12 Branch Point Sequence:

GGTGTTTGAAGT

Flanking Amino Acid:

FKKDPKDFADRFLYEYVSSY

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

69.4

0.48

1.2

63.4

44.3

Major PPT

64.6

0.33

57.3

37.8

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

46.5

-0.1

1.8

61.45

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011564

16304123 - 16310115

5993