Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_16367563_16367660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16367563 - 16367660

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCTG

5'SS Class:

major

3'SS Sequence:

CGGTTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

CTTCCCTCAACC

Flanking Amino Acid:

PASFQEKGCKVIYMARNAKD

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

66.2

44.9

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

67.1

0.38

57.5

43.2

Minor 5ss

34.4

-1.8

3.4

47.3

48.1

Minor BPS

68.8

0.57

1.6

76.58

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029701

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032726

16366481 - 16368645

2165