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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16370836_16370953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16370836 - 16370953

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGGG

5'SS Class:

major

3'SS Sequence:

GCGCTTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCGGAA

U12 Branch Point Sequence:

GGTAGCGGAAGC

Flanking Amino Acid:

EFAAPGQMLAGTEQLEGMPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.3

Major BPS

43.4

-0.4

1.3

34.8

34.9

Major PPT

0.54

0.9

68.8

37.1

Minor 5ss

32.8

-2

3.8

46.4

Minor BPS

35.8

-1.1

2.4

45.48

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038940

16369386 - 16372014

2629