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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16371471_16371543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16371471 - 16371543

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGCGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGAAT

U12 Branch Point Sequence:

CGGGGCTGAATG

Flanking Amino Acid:

LYLFYEDMKEDPRREITKVA

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

47.7

-0.1

1.6

57.6

45.8

Major PPT

65.5

0.35

56.8

38.7

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

42.2

-0.7

40.18

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038940

16369386 - 16372014

2629