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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16382054_16387088_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16382054 - 16387088

Intron Length:

5035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

ACCTTGTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TTGTGCTAAATG

Flanking Amino Acid:

NWDQYYSEVLGRPTTLCETM

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

66.9

0.38

0.9

60.9

34.6

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

51.1

-0.1

2.2

62.53

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024543

16381339 - 16392247

10909