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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16387238_16388515_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16387238 - 16388515

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCAGA

5'SS Class:

major

3'SS Sequence:

TTCTGCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TCACTATTATCA

Flanking Amino Acid:

HCQPAKPLPKEMEEFVQSSG

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

63.5

42.4

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

73.7

0.53

0.8

65.9

Minor 5ss

44.9

-0.5

2.6

58.2

Minor BPS

47.6

-0.1

1.8

58.51

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024543

16381339 - 16392247

10909

ENSAPLT00000010627

16384259 - 16391061

6803