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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16390128_16390784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16390128 - 16390784

Intron Length:

657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTGAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACAAAT

U12 Branch Point Sequence:

AGTGACAAATCT

Flanking Amino Acid:

DAVNTVINNSSYKENALRLS

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.3

76.6

34.9

Major BPS

51.7

0.04

1.2

59.2

35.9

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

42.2

-0.9

58.8

40.3

Minor BPS

38.7

-0.7

2.2

57.1

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024543

16381339 - 16392247

10909

ENSAPLT00000010627

16384259 - 16391061

6803