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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16394600_16395312_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16394600 - 16395312

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

CCTTTCATCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTCCTTTCATC

Flanking Amino Acid:

HEARYRDKRVHDYDMRVDDF

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

75.1

33.1

Major BPS

100

1.24

0.5

100

Major PPT

78.4

0.64

0.8

72.5

30.7

Minor 5ss

39.1

-1.2

3.3

54.2

38.3

Minor BPS

57.1

0.21

1.7

68.24

37.6

Associated Gene:

Gene:

YTHDC1

Ensembl Gene ID:

ENSAPLG00000009921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039475

16394268 - 16415503

21236

ENSAPLT00000027908

16394268 - 16415503

21236

ENSAPLT00000025312

16394268 - 16415503

21236

ENSAPLT00000010362

16374110 - 16415503

41394

ENSAPLT00000041490

16394268 - 16415503

21236