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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16397393_16398828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16397393 - 16398828

Intron Length:

1436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAATATC

5'SS Class:

major

3'SS Sequence:

GATGTTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATTAAATTAACA

Flanking Amino Acid:

DYPPEFHQRPGYIKDPRYPE

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

79.7

33.4

Major BPS

73.8

0.59

0.9

26.8

Major PPT

63.2

0.3

1.1

58.2

46.1

Minor 5ss

-1.6

2.8

46.1

42.1

Minor BPS

0.28

1.8

73.51

37.2

Associated Gene:

Gene:

YTHDC1

Ensembl Gene ID:

ENSAPLG00000009921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025312

16394268 - 16415503

21236

ENSAPLT00000010362

16374110 - 16415503

41394

ENSAPLT00000041490

16394268 - 16415503

21236

ENSAPLT00000039475

16394268 - 16415503

21236

ENSAPLT00000027908

16394268 - 16415503

21236