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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16398912_16401458_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16398912 - 16401458

Intron Length:

2547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CTAATTTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTTGTTTAATT

Flanking Amino Acid:

SRRDPVRDVGRRRPEDYDIH

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.1

76.3

32.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

69.5

0.44

64.8

41.1

Minor 5ss

30.1

-2.3

2.7

34.9

41.1

Minor BPS

68.5

0.66

1.7

82.98

39.3

Associated Gene:

Gene:

YTHDC1

Ensembl Gene ID:

ENSAPLG00000009921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025312

16394268 - 16415503

21236

ENSAPLT00000010362

16374110 - 16415503

41394

ENSAPLT00000041490

16394268 - 16415503

21236

ENSAPLT00000039475

16394268 - 16415503

21236

ENSAPLT00000027908

16394268 - 16415503

21236