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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16410872_16411500_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16410872 - 16411500

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGAC

5'SS Class:

major

3'SS Sequence:

CTTTTTATTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTTATTT

Flanking Amino Acid:

DSEQDKSEKKGSKRKSDRME

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

66.7

39.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.65

83.8

Minor 5ss

31.1

-2.2

3.4

34.1

42.2

Minor BPS

59.2

0.37

1.5

72.97

39.1

Associated Gene:

Gene:

YTHDC1

Ensembl Gene ID:

ENSAPLG00000009921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025994

16401459 - 16415503

14045

ENSAPLT00000025312

16394268 - 16415503

21236

ENSAPLT00000041490

16394268 - 16415503

21236

ENSAPLT00000010362

16374110 - 16415503

41394

ENSAPLT00000039475

16394268 - 16415503

21236

ENSAPLT00000027908

16394268 - 16415503

21236