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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16413912_16415475_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16413912 - 16415475

Intron Length:

1564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCCCG

5'SS Class:

major

3'SS Sequence:

CCTGCTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAACAC

U12 Branch Point Sequence:

CCCAGGTTACTT

Flanking Amino Acid:

MAADSREEKGELNLFMEGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.3

48.3

47.8

Major BPS

47.8

-0.1

53.1

30.9

Major PPT

75.9

0.58

0.9

72.1

37.9

Minor 5ss

42.7

-0.8

3.1

57.6

46.6

Minor BPS

36.5

-0.9

2.4

46.97

46.1

Associated Gene:

Gene:

YTHDC1

Ensembl Gene ID:

ENSAPLG00000009921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027908

16394268 - 16415503

21236

ENSAPLT00000025994

16401459 - 16415503

14045

ENSAPLT00000025312

16394268 - 16415503

21236

ENSAPLT00000010362

16374110 - 16415503

41394

ENSAPLT00000041490

16394268 - 16415503

21236