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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16443396_16446006_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

16443396 - 16446006

Intron Length:

2611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTAATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TCTTTCCTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

81.9

0.79

0.9

80.1

Major PPT

80.3

0.68

0.9

78.6

33.5

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

68.2

0.65

1.6

83.92

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010088

16443116 - 16464088

20973