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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16456881_16458421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16456881 - 16458421

Intron Length:

1541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGGTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CTTTGTTTATGT

Flanking Amino Acid:

RYIRSHVVSLSPDPGGVLVS

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.7

0.67

72.9

42.2

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

47.6

-0.1

2.3

70.73

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010088

16443116 - 16464088

20973