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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16462085_16462312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16462085 - 16462312

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

AAATGTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCAAAT

U12 Branch Point Sequence:

CTCGTCTCAAAT

Flanking Amino Acid:

WLVTAAHCFRGAKEPRRWTA

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.9

38.6

Major BPS

64.9

0.37

1.1

70.9

31.9

Major PPT

71.7

0.49

66.8

43.9

Minor 5ss

35.4

-1.7

44.5

Minor BPS

48.7

-0

1.8

64.47

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010088

16443116 - 16464088

20973