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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16462579_16463384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16462579 - 16463384

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CTGTCTGCAAAT

Flanking Amino Acid:

VTGWGALENDGYSVNQLRQA

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.8

77.5

30.7

Major BPS

81.9

0.79

0.9

80.1

Major PPT

84.9

0.78

0.7

77.7

31.1

Minor 5ss

31.9

-2.1

3.3

40.3

40.2

Minor BPS

45.1

-0.2

2.2

64.83

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010088

16443116 - 16464088

20973