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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16525146_16526276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16525146 - 16526276

Intron Length:

1131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

CTTCCAGTAAAT

Flanking Amino Acid:

AKNIILAGVKALTVHDTKQC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

83.4

30.3

Major BPS

71.4

0.53

67.3

39.3

Major PPT

84.1

0.77

0.6

84.3

23.6

Minor 5ss

-1.8

2.9

41.9

44.8

Minor BPS

47.1

-0.1

2.3

72.05

44.2

Associated Gene:

Gene:

UBA6

Ensembl Gene ID:

ENSAPLG00000009066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009508

16520282 - 16551375

31094