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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16533235_16533873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16533235 - 16533873

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAATGCAG

5'SS Class:

major

3'SS Sequence:

CCCTGGTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TTGTTTCTACCC

Flanking Amino Acid:

QENFGRMPNIGCLQDAEEML

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.1

53.3

45.2

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

61.6

0.26

52.8

41.6

Minor 5ss

29.7

-2.3

3.2

30.3

42.9

Minor BPS

49.4

-0

1.9

65.89

40.3

Associated Gene:

Gene:

UBA6

Ensembl Gene ID:

ENSAPLG00000009066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009508

16520282 - 16551375

31094