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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16535059_16535311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16535059 - 16535311

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAATATA

5'SS Class:

strong_major

3'SS Sequence:

TGCCCCTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGAT

U12 Branch Point Sequence:

AGCTTGATACTC

Flanking Amino Acid:

EKMGSEEFLPRGDRYDALRA

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

80.8

33.4

Major BPS

66.1

0.4

1.3

59.3

47.1

Major PPT

71.7

0.49

0.8

65.8

30.2

Minor 5ss

39.1

-1.2

2.9

51.6

45.1

Minor BPS

-0.9

2.2

45.27

37.6

Associated Gene:

Gene:

UBA6

Ensembl Gene ID:

ENSAPLG00000009066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009508

16520282 - 16551375

31094