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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16538129_16538711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16538129 - 16538711

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCATGTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TAATCTGTATCC

Flanking Amino Acid:

DNVEARRYIDSRCVANLRPL

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

74.8

0.56

74.1

35.2

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

48.5

-0.1

2.2

64.12

41.5

Associated Gene:

Gene:

UBA6

Ensembl Gene ID:

ENSAPLG00000009066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009508

16520282 - 16551375

31094