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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16538818_16539492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16538818 - 16539492

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

TCCTTAAATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTCTCCTTAAAT

Flanking Amino Acid:

PHLTESYNSHRDPPEEEIPF

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.3

76.2

39.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

72.4

0.51

66.3

37.7

Minor 5ss

35.8

-1.6

3.3

48.4

41.2

Minor BPS

83.7

1.14

1.2

93.4

34.6

Associated Gene:

Gene:

UBA6

Ensembl Gene ID:

ENSAPLG00000009066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009508

16520282 - 16551375

31094