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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16541388_16541669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16541388 - 16541669

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TCTTCCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AAAAAATTAAAA

Flanking Amino Acid:

FPVKFEFNDPLHYGFIVSAA

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

76.5

38.6

Major BPS

73.8

0.59

0.9

26.8

Major PPT

87.2

0.84

0.6

22.6

Minor 5ss

41.9

-0.9

2.8

57.5

Minor BPS

45.3

-0.3

1.8

53.28

37.1

Associated Gene:

Gene:

UBA6

Ensembl Gene ID:

ENSAPLG00000009066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009508

16520282 - 16551375

31094