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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16541740_16542937_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16541740 - 16542937

Intron Length:

1198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCCAT

5'SS Class:

major

3'SS Sequence:

AAAACCATAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTTTCTTCAAAA

Flanking Amino Acid:

TVYCVPFTEKDLSEETILKI

Intron Amino Acid Position:

746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

70.7

41.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

49.7

-0

41.8

37.1

Minor 5ss

39.6

-1.2

3.1

56.4

47.8

Minor BPS

69.2

0.6

1.6

81.08

34.1

Associated Gene:

Gene:

UBA6

Ensembl Gene ID:

ENSAPLG00000009066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009508

16520282 - 16551375

31094