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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16554265_16555424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16554265 - 16555424

Intron Length:

1160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTTTCTGTGAAA

Flanking Amino Acid:

TSYIIELERKVSLASLQDVI

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

73.8

0.59

1.3

72.8

Major PPT

66.3

0.37

1.1

42.6

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

54.9

0.15

2.1

75.09

36.4

Associated Gene:

Gene:

STAP1

Ensembl Gene ID:

ENSAPLG00000008926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009288

16554064 - 16562062

7999