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Intron Name: Anas_platyrhynchos_platyrhynchos_4_16556272_16556895_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16556272 - 16556895

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGCTCT

5'SS Class:

weak_major

3'SS Sequence:

CCCATCTGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

CTTGCGTTCACG

Flanking Amino Acid:

DNSSTATAMPACFYAVSRKE

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.4

63.3

43.9

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

0.45

64.2

36.5

Minor 5ss

47.4

-0.3

2.8

61.5

43.1

Minor BPS

45.9

-0.4

2.6

58.33

49.3

Associated Gene:

Gene:

STAP1

Ensembl Gene ID:

ENSAPLG00000008926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009288

16554064 - 16562062

7999